Downloads

asSeq_0.99.2.tar.gz asSeq_0.99.301.tar.gz    ( vignettes )    update extractAsReads to allow soft and hard clips

Reference

Wei Sun, (2011), A Statistical Framework for eQTL Mapping Using RNA-seq Data, Biometrics, 2012 Mar;68(1):1-11 Epub 2011 Aug 12. Download pdf         Download data and results

Wei Sun and Yijuan Hu (2012), eQTL mapping using RNA-seq data, Statistics in Biosciences, in press. Download pdf

FAQ

Installation This R package has been submitted to R/bioconductor. It will be available on bioconductor soon. It is recommended to install this R package from bioconductor. You can also install this R package from the source code by yourself. Since the R package contains C code, a C complier is required for installation. With both R and appropriate c complier installed, this R package can be installed using the following command (in Mac Terminal window or Windows command window) R CMD INSTALL asSeq Please contact me (wesun@email.unc.edu) if you need older version of this package.